European Journal of Chemistry

QSAR rationales for the 1,2-diarylcyclopentenes as prostaglandin EP1 receptor antagonists: Potentially useful in the treatment of inflammatory pain



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Brij Kishore Sharma
Pradeep Pilania
Prithvi Singh

Abstract

The EP1 receptor inhibitory activity of 1,2-diarylcyclopentene derivatives have been quantitatively analyzed in terms of Dragon descriptors. The derived QSAR models have provided rationales to explain the EP1 receptor inhibitory activity of 1,2-diarylcyclopentene derivatives. The 2D-autocorrelation descriptors (MATS4e, MATS5e, MATS7v, GATS5e and GATS7v) have highlighted the role of atomic properties in respective lags of autocorrelations to explain the biological actions of 1,2-diarylcyclopentene analogues. Presence of fluorine atom (nF) and smaller distance between N and O atoms (T(N..O)) in molecular structures, in addition to Kier-Hall electrotopological states (Ss) have also shown prevalence to optimize the EP1 receptor inhibitory activity. Partial least square analysis has confirmed the dominance of information content of the combinatorial protocol in multiple linear regression identified descriptors. Applicability domain analysis revealed that the suggested model matches the high quality parameters with good fitting power and capability of assessing external data. All the compounds are within the applicability domain of the proposed model and were evaluated correctly.

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Sharma, B. K.; Pilania, P.; Singh, P. QSAR Rationales for the 1,2-Diarylcyclopentenes As Prostaglandin EP1 Receptor Antagonists: Potentially Useful in the Treatment of Inflammatory Pain. Eur. J. Chem. 2010, 1, 325-334.

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References

[1]. Murakami, M.; Nakatani, Y.; Tanioka, T.; Kudo, I. Prostaglandins Other Lipid Mediat. 2002, 68-69, 383-399.
doi:10.1016/S0090-6980(02)00043-6

[2]. Claveau, D.; Sirinyan, M.; Guay, J.; Gordon, R.; Chan, C-C.; Bureau, Y.; Riendeau, D.; Mancini, J. A. J. Immunol. 2003, 170, 4738-4744.

[3]. Trebino, C. E.; Stock, J. L.; Gibbons, C. P.; Naiman, B. M.; Wachtmann, T. S.; Umland, J. P.; Pandher, K.; Lapointe, J-M.; Saha, S.; Roach, M. L.; Carter, D.; Thomas, N. A.; Durtschi, B. A.; McNeish, J. D.; Hambor, J. E.; Jakobsson, P-J.; Carty, T. J.; Perez J. R.; Audoly, L. P. Proc. Natl. Acad. Sci. U.S.A. 2003, 100, 9044-9049.
doi:10.1073/pnas.1332766100
PMid:12835414    PMCid:166435

[4]. Kamei, D.; Yamakawa, K.; Takegoshi, Y.; Mikami-Nakanishi, M.; Nakatani, Y.; Oh-ishi, S.; Yasui, H.; Azuma, Y.; Hirasawa, N.; Ohuchi, K.; Kawaguchi, H.; Ishikawa, Y.; Ishii, T.; Uematsu, S.; Akira, S.; Murakami, M.; Kudo, I. J. Biol. Chem. 2004, 279, 33684-33695.
doi:10.1074/jbc.M400199200
PMid:15140897

[5]. Mabuchi, T.; Kojima, H.; Abe, T.; Takagi, K.; Sakurai, M.; Ohmiya, Y.; Uematsu, S.; Akira, S.; Watanabe, K.; Ito, S. Neuroreport 2004, 15, 1395-1398.
doi:10.1097/01.wnr.0000129372.89000.31
PMid:15194860

[6]. Camu, F.; Shi, L.; Vanlersberghe, C. Drugs 2003, 63(suppl. 1), 1-7.
doi:10.2165/00003495-200363001-00002
PMid:14506906

[7]. Bianchi, M.; Broggini, M. Drugs 2003, 63(suppl. 1), 37-46.
doi:10.2165/00003495-200363001-00006
PMid:14506910

[8]. Jeger, R. V.; Greenberg, J. D.; Ramanathan, K.; Farkouh, M. E. Exp. Rev. Clin. Immunol. 2005, 1, 37-45.
doi:10.1586/1744666X.1.1.37
PMid:20477653

[9]. Lee, Y.; Rodriguez, C.; Dionne, R. A. Curr. Pharm. Des. 2005, 11, 1737-1755.
doi:10.2174/1381612053764896
PMid:15892672

[10]. Akarca, U. S. Curr. Pharm. Des. 2005, 11, 1779-1793.
doi:10.2174/1381612053764904
PMid:15892675

[11]. Sheen, C. L.; MacDonald, T. M. Exp. Opin. Pharmacother. 2002, 3, 265-269.
doi:10.1517/14656566.3.3.265
PMid:11866677

[12]. Hawkey, C. J.; Jackson, L.; Harper, S. E.; Simon, T. J.; Mortensen, E.; Lines, C. R. Aliment. Pharmacol. Ther. 2001, 15, 1-9.
doi:10.1046/j.1365-2036.2001.00894.x

[13]. Bombardier, C.; Laine, L.; Reicin, A.; Shapiro, D.; Burgos-Vargas, R.; Davis, B.; Day, R.; Bosi Ferraz, M.; Hawkey, C. J.; Hochberg, M. C.; Kvien T. K.; Schnitzer, T. J.; VIGOR study group. N. Eng. J. Med. 2000, 343, 1520-1528.
doi:10.1056/NEJM200011233432103
PMid:11087881

[14]. Silverstein, F. E.; Faich, G.; Goldstein, J. L.; Simon, L. S.; Pincus, T.; Whelton, A.; Makuch, R.; Eisen, G.; Agrawal, N. M.; Stenson, W. F.; Burr, A. M.; Zhao, W. W.; Kent, J. D.; Lefkowith, J. B.; Verburg, K. M.; Geis, G. S. J. Am. Med. Assoc. 2000, 284, 1247-1255.
doi:10.1001/jama.284.10.1247
PMid:10979111

[15]. Merck & Co. Press Release; 30 September 2004. http://www.merck.com.

[16]. Mukherjee, D.; Nissen, S. E.; Topol, E. J. J. Am. Med. Assoc. 2001, 286, 954-959.
doi:10.1001/jama.286.8.954
PMid:11509060

[17]. Mamdani, M.; Juurlink, D. N.; Lee, D. S.; Rochon, P. A.; Kopp, A.; Naglie, G.; Austin, P. C.; Laupacis, A.; Stukel, T. A. Lancet 2004, 363, 1751-1756.
doi:10.1016/S0140-6736(04)16299-5

[18]. Scheen, A. J. Rev. Med. Liege 2004, 59, 565-569.
PMid:15623076

[19]. Bresalier, R. S.; Sandier, R. S.; Quan, H.; Bolognese, J. A.; Oxenius, B.; Horgan, K.; Lines, C.; Riddell, R.; Morton, D.; Lanas, A.; Konstam, M. A.; Baron, J. A. N. Engl. J. Med. 2005, 352, 1092-1102.
doi:10.1056/NEJMoa050493
PMid:15713943

[20]. Solomon, S. D.; McMurray, J. J. V.; Pfeffer, M. A.; Wittes, J.; Fowler, R.; Finn, P.; Anderson, W. F.; Zauber, A.; Hawk E.; Bertagnolli, M. N. Engl. J. Med. 2005, 352, 1071-1080.
doi:10.1056/NEJMoa050405
PMid:15713944

[21]. Fitzgerald, G. A. N. Engl. J. Med. 2004, 351, 1709-1711.
doi:10.1056/NEJMp048288
PMid:15470192

[22]. Lagakos, S. W. N. Engl. J. Med. 2006, 355, 113-117.
doi:10.1056/NEJMp068137
PMid:16801354

[23]. Meagher, E. A. Curr. Pharm. Des. 2004, 10, 603-611.
doi:10.2174/1381612043453153
PMid:14965323

[24]. Coleman, R. A.; Smith, W. L.; Narumiya, S. Pharmacol. Rev. 1994, 46, 205-229.
PMid:7938166

[25]. Breyer, R. M.; Bagdassarian, C. K.; Myers, S. A.; Breyer, M. D. Annu. Rev. Pharmacol. Toxicol. 2001, 41, 661-690.
doi:10.1146/annurev.pharmtox.41.1.661
PMid:11264472

[26]. Narumiya, S.; Sugimoto, Y.; Ushikubi, F. Physiol. Rev. 1999, 79, 1193-1226.
PMid:10508233

[27]. Coleman, R. A.; Kennedy, I.; Humphrey, P. P. A.; Bunce, K.; Lumley, P. Comprehensive Medicinal Chemistry, 3rd volume, Pergamon: Oxford, UK, 1990.

[28]. Hata, A. N.; Breyer, R. M. Pharmacol. Ther. 2004, 103, 147-166.
doi:10.1016/j.pharmthera.2004.06.003

[29]. Ungrin, M. D.; Carrière, M-C.; Denis, D.; Lamontagne, S.; Sawyer, N.; Stocco, R.; Tremblay, N.; Metters, K. M.; Abramovitz, M. Mol. Pharmacol. 2001, 59, 1446–1455.
PMid:11353805

[30]. Hallinan, E.; Hagen, T.; Jusa, R.; Tsymbalov, S.; Rao, S.; van Hoeck, J-P.; Rafferty, M.; Stapelfeld, A.; Savage, M.; Reichman, M. J. Med. Chem. 1993, 36, 3293-3299.
doi:10.1021/jm00074a010
PMid:7901416

[31]. Hallinan, E.; Stapelfeld, A.; Savage, M.; Reichman, M. Bioorg. Med. Chem. Lett. 1994, 4, 509-514.
doi:10.1016/0960-894X(94)80027-8

[32]. Lanthorn, T.; Bianchi, R.; Perkins, W. Drug Dev. Res. 1995, 34, 35–38.
doi:10.1002/ddr.430340106

[33]. Novel EP1 receptor antagonists. Expert Opin. Ther. Patents 2004, 14, 435-438.

[34]. Breault, G.A. WO9700863A1, 1997.

[35]. Watanabe, K.; Kawamori, T.; Nakatsugi, S.; Ohta, T.; Ohuchida, S.; Yamamoto, H.; Maruyama, T.; Kondo, K.; Narumiya, S.; Sugimura, T.; Wakabayashi, K. Cancer Lett. 2000, 156, 57-61.
doi:10.1016/S0304-3835(00)00440-7

[36]. Ducharme, Y.; Blouin, M.; Carrière, M. C.; Chateauneuf, A.; Côte, B.; Denis, D.; Frenette, R.; Greig, G.; Kargman, S.; Lamontagne, S.; Martins, E.; Nantel, F.; O’Neill, G.; Sawyer, N.; Metters, K. M.; Friesen, R. W. Bioorg. Med. Chem. Lett. 2005, 15, 1155-1160.
doi:10.1016/j.bmcl.2004.12.005

[37]. Minami, T.; Nakano, H.; Kobayashi, T.; Sugimoto, Y.; Ushikubi, F.; Ichikawa, A.; Narumiya, S.; Ito, S. Br. J. Pharmacol. 2001, 133, 438-444.
doi:10.1038/sj.bjp.0704092
PMid:11375261    PMCid:1572799

[38]. Mebane, H.; Turnbach, M. E.; Randich, A. J. Pain 2003, 4, 392-399.
PMid:11160156    PMCid:199184

[39]. Stock, J. L.; Shinjo, K.; Burkhardt, J.; Roach, M.; Taniguchi, K.; Ishikawa, T.; Kim, H-S.; Flannery, P. J.; Coffman, T. M.; McNeish, J. D.; Audoly, L. P. J. Clin. Invest. 2001, 107, 325-331.
doi:10.1172/JCI6749

[40]. Omote, K.; Kawamata, T.; Nakayama, Y.; Kawamata, M.; Hazama, K.; Namiki, A. Anesth. Analg. 2001, 92, 233-238.
doi:10.1097/00000539-200101000-00045

[41]. Omote, K.; Yamamoto, H.; Kawamata, T.; Nakayama, Y.; Namiki, A. Anesth. Analg. 2002, 95, 1708-1712.
doi:10.1097/00000539-200212000-00044

[42]. Kawahara, H.; Sakamoto, T.; Takeda, S.; Onodera, H.; Imaki, J.; Ogawa, R. Anesth. Analg. 2001, 93, 1012-1017.
doi:10.1097/00000539-200110000-00043

[43]. Giblin, G. M. P.; Bit, R. A.; Brown, S. H.; Chaignot, H. M.; Chowdhury, A.; Chessell, I. P.; Clayton, N. M.; Coleman, T.; Hall, A.; Hammond, B.; Hurst, D. N.; Michel, A. D.; Naylor, A.; Novelli, R.; Scoccitti, T.; Spalding, D.; Tang, S. P.; Wilson, A. W.; Wilson, R. Bioorg. Med. Chem. Lett. 2007, 17, 385-389.
doi:10.1016/j.bmcl.2006.10.041

[44]. SYSTAT, Version 7.0; SPSS Inc., 444 North Michigan Avenue, Chicago, IL, 60611.

[45]. ChemDraw Ultra 6.0 and Chem3D Ultra, Cambridge Soft Corporation, Cambridge, USA. http://www.cambridgesoft.com

[46]. Dragon software (version 1.11-2001) by Todeschini R.; Consonni V. Milano, Italy. http://www.talete.mi.it/dragon.htm

[47]. Prabhakar, Y. S. QSAR Comb. Sci. 2003, 22, 583-595.
doi:10.1002/qsar.200330814

[48]. Wold, S. Technometrics 1978, 20, 397-405.
doi:10.2307/1267639

[49]. Kettaneh, N.; Berglund, A.; Wold, S. Comput. Stat. Data Anal. 2005, 48, 69-85.
doi:10.1016/j.csda.2003.11.027

[50]. Stahle, L.; Wold, S. Biomedical Research, Progress in Medicinal Chemistry, vol. 25, Elsevier Science Publishers, BV, 1998.

[51]. Sharma, B. K.; Pilania, P.; Singh, P.; Sharma, S.; Prabhakar, Y. S. Cent. Eur. J. Chem. 2009, 7, 909-922.
doi:10.2478/s11532-009-0073-4
PMid:18825552

[52]. Sharma, B. K.; Pilania, P.; Singh, P. J. Enz. Inhib. Med. Chem. 2009, 24, 607-615.
doi:10.1080/14756360802318878
PMid:19548781

[53]. Sharma, S.; Sharma, B. K.; Pilania, P.; Singh, P.; Prabhakar, Y. S. J. Enz. Inhib. Med. Chem. 2009, 24, 1024-1033.
doi:10.1080/14756360802608054
PMid:20373219

[54]. Sharma, B. K.; Pilania, P.; Singh, P.; Prabhakar, Y. S. SAR QSAR Environ. Res. 2010, 21, 169-185.
doi:10.1080/10629360903570545
PMid:19657719

[55]. Sharma, B. K.; Pilania, P.; Sarbhai, K.; Singh, P.; Prabhakar, Y. S. Mol. Divers. 2010, 14, 371-384.
doi:10.1007/s11030-009-9181-5

[56]. Akaike, H. Second international symposium on information theory, Akademiai Kiado, Budapest, 1973.

[57]. Akaike, H. IEEE Trans. Automat. Contr. 1974, AC-19, 716-723.
doi:10.1109/TAC.1974.1100705

[58]. Kubinyi, H. Quant. Struct.-Act. Relat. 1994, 13, 285-294.

[59]. Kubinyi, H. Quant. Struct.-Act. Relat. 1994, 13, 393-401.
PMid:9435904

[60]. Friedman, J. Technical report no. 102. Laboratory for computational statistics. Stanford University, Stanford, 1990.

[61]. So, S. -S.; Karplus, M. J. Med. Chem. 1997, 40, 4347-4359.
doi:10.1021/jm970487v

[62]. Prabhakar, Y. S.; Solomon, V. R.; Rawal, R. K.; Gupta, M. K.; Katti, S. B. QSAR Comb. Sci. 2004, 23, 234-244.
doi:10.1002/qsar.200330854

[63]. Gramatica, P. QSAR Comb. Sci. 2007, 26, 694-701.
doi:10.1002/qsar.200610151

[64]. Golbraikh, A.; Tropsha, A. J. Mol. Graph. Model. 2002, 20, 269-276.
doi:10.1016/S1093-3263(01)00123-1

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